TIGR
MPSS
TAIR
MIPS
 
 

AGI number: At3g05880
TIGR annotation:hydrophobic protein (RCI2A) / low temperature and salt responsive protein (LTI6A)
Data resource: NASCArrays
Normalisation: MAS5

 
  Present call   Marginal call   Absent call   None call (Affymetrix)
       
Experiment Relative expression value St. dev.
 0.10 Seed, mature (SM01)  815.9   270.82
 1339.5 
 1197.8 
 0.10 Seed, primary dormant imbibed (SDI1)  4426.5   180.78
 4299.7 
 4685.5 
 4304.5 
 0.10 Seed, primary dormant (SDP1)  3161.3   162.32
 3507.3 
 3435 
 3239.3 
 0.10 Seed, non-dormant (SND1)  935.4   32.12
 987.3 
 943.3 
 1000.5 
 0.70 Seedling (SL01)  5600.1   312.23
 5173.1 
 4992 
 0.70 Seedling (SL02)  4351.4   214.96
 4623.5 
 4775.8 
 0.70 Seedling (SL10)  1397.6   78.85
 1296.8 
 1452.3 
 0.70 Seedling (SL12)  3083.4   722.12
 3921.3 
 2483.6 
 0.70 Hypocotyl (HP01)  2865.4   636.75
 3706.5 
 4114 
 0.70 Hypocotyl (HP02)  1937.1   26.66
 1949.3 
 1898.3 
 1.00 Seedling (SL07)  7073.2   95.25
 7207.9 
 1.00 Seedling (SL09)  6369.9   437.74
 6656.3 
 7229.6 
 1.00 Seedling (SL11)  5279.3   2531.93
 4952.9 
 9115.3 
 9818.8 
 1.00 Hypocotyl (HP03)  4199.6   536.37
 3441 
 1.00 Seedling, whole plant (WP04)  9576.2   753.59
 10271.9 
 8766.2 
 1.00 Cotyledons and Hypocotyl together (SH02)  6636   115.44
 6405.4 
 6510.8 
 1.02 Seedling (SL08)  8111.8   268.03
 8490.8 
 1.02 Roots (RT01)  6290.6   589.78
 7124.7 
 1.02 Lateral roots (RH01)  4217   678.02
 4083.9 
 5319.2 
 1.03 Seedling, whole plant (WP02)  6938.2   1162.52
 8454.5 
 9222.8 
 1.05 Rosette (LF11)  1690.9   153.18
 1467.4 
 1760.6 
 1.14 Rosette (LF12)  6965   641.03
 5686.8 
 6240.2 
 1.14 Rosette (LF13)  3935.8   437.08
 4553.9 
 3.20 Whole plant (WP05)  6875.1   321.38
 6745.7 
 6265.1 
 3.70 Adult leaf (LF01)  1977.1   14.29
 2005.5 
 1988.8 
 3.70 Adult leaf (LF02)  1403.3   161.95
 1516.5 
 1722.8 
 3.90 Leaf, petiole (PT01)  5184.2   202.42
 4809.4 
 4864.2 
 3.90 Adult leaf (LF03)  3286.4   449.87
 2470.9 
 2549.5 
 3.90 Guard cell-enriched leaf extract (GC01)  3906.6   51
 3995.7 
 3994.1 
 3.90 Rosette (SH01)  4689.5   993.63
 5350.2 
 6642.9 
 3.90 Roots (RT04)  3269.8   929.5
 5027.1 
 4673.6 
 3.90 Roots (RT05)  3378.5   287.83
 3110.4 
 3685.6 
 3.90 Juvenile leaf (LF14)  1669.7   184.77
 2034 
 1894.8 
 2081.6 
 5.10 Flower, buds (FB01)  3803.5   966.32
 2436.9 
 5.10 Flower, young buds (BY01)  6391.8   592.63
 7137 
 7562.7 
 5.10 Flower, old buds (BO01)  7580   347.02
 8226.6 
 7684.9 
 5.10 Roots (RT02)  5991.3   1857
 3365.1 
 5.10 Pollen grain, microspore (MS01)  243.8   59.85
 328.4 
 5.10 Pollen grain, 2-cellular (BC01)  238.7   35.92
 289.5 
 5.10 Pollen grain, 3-cellular (TC01)  285.9   59.2
 369.6 
 5.10 Pollen grain, mature (MP01)  325.3   21.75
 356 
 6.00 Leaf (LF08)  7056.5   2819.04
 1421.6 
 4403 
 6.00 Leaf (LF16)  5686.3   106.77
 5877 
 5698.5 
 6.00 Inflorescence (IN01)  2313.1   778.91
 3414.6 
 6.10 Leaf (LF10)  8258.9   219.47
 8469.6 
 8030.8 
 6.10 Stem base (ST01)  6940.2   371.28
 7465.3 
 6.10 Stem top (ST02)  6826.3   44.05
 6764 
 6.10 Flower, open (FL01)  2708.7   280.89
 2311.5 
 6.30 Silique, young (FS01)  2807.2   809.59
 1662.3 
 6.90 Silique, mature green (SQ01)  3178.5   1233.32
 4751 
 5610.6 
 6.90 Seed, fresh (SF01)  4867.5   277.5
 4316.3 
 4647.7 
 8.00 Silique, senescing pod tissue (SP01)  1724.5   220.26
 1620.4 
 2043.2 
 Suspension cell culture (SU01)  4809.8   260.02
 4544.7 
 4289.8 
 Suspension cell culture (SU02)  6005.8   1430.22
 3983.1 
 Xylem (XL01)  1565.3   369.56
 832.9 
 1285.1 
 Cork (CR01)  970.7   153.45
 1270.8 
 1176.6 
 Globular embryo, apical cells (EGA1)  182.3   23.47
 212.8 
 228.5 
 Globular embryo, basal cells (EGB1)  235.2   29.51
 176.3 
 203.7 
 Heart embryo, cotyledons (EHC1)  1395.6   661.58
 278.8 
 222.6 
 Heart embryo, roots (EHR1)  126.7   68.06
 261 
 213 
 Torpedo embryo, apical cells (ETA1)  965.2   601.05
 1389.7 
 203.5 
 Torpedo embryo, basal cells (ETB1)  352.1   766.83
 1075.8 
 1885 
 Torpedo embryo, cotyledons (ETC1)  210.9   104.4
 161.3 
 361.7 
 Torpedo embryo, meristem (ETM1)  1822.3   2318.3
 1655.9 
 5752 
 Torpedo embryo, roots (ETR1)  322.1   92.68
 406.6 
 221.4 
Normalisation: MAS5
change to: MAS4
Data resource: NASCArrays
     change to: AtGenExpress